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33 Open 24 Closed
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Issues list

generatedNeuroML2 directory does not include synapses
#112 opened Dec 13, 2018 by clbarnes
3
Allow c302 to add new connections between specific cells & document these as bioparameters
#108 opened Feb 21, 2018 by pgleeson
Move storage of images to git-lfs as opposed to checking in every time regenerated
#107 opened Feb 21, 2018 by pgleeson
@pgleeson
Generate outline of what is the model and basic facts about c. elegans neurophysiology
#101 opened Dec 17, 2017 by slarson
2
Sometimes nrniv tasks don't get terminated after CTRL+C
#87 opened Jun 7, 2017 by lungd
2
Discussions on simulating the worm's crawling by means of command neurons, motor neurons and muscle cells c302 in progress tests
#82 opened Mar 8, 2017 by raminmh
@lungd @raminmh
4
Implement parameters D
#71 opened Oct 28, 2016 by pgleeson
2 of 3 tasks
Running OpenWorm simulations on SpiNNaker
#70 opened Oct 28, 2016 by pgleeson
1
What would it take to replay a specific pattern of activity into certain c302 neurons during a simulation run? question
#63 opened Jul 5, 2016 by slarson
1
Can c302 with jNeuroML-NEURON take advantage of multiple CPU cores? question
#62 opened Jul 3, 2016 by slarson
3
What would it take to include activity dependent conductances? question
#60 opened Jul 2, 2016 by slarson
Test python scripts tests
#53 opened Aug 23, 2015 by travs
3 tasks
Adapt validation framework from PyOpenWorm and ChannelWorm
4
Ensure consistent directory structure and naming schemes for tests SciUnit tests
#52 opened Aug 9, 2015 by gsarma Adapt validation framework from PyOpenWorm and ChannelWorm
Check for performance regressions in testing suite tests
#51 opened Aug 9, 2015 by gsarma Adapt validation framework from PyOpenWorm and ChannelWorm
Create tests to catch performance regressions in specific functions tests
#50 opened Aug 9, 2015 by gsarma Adapt validation framework from PyOpenWorm and ChannelWorm
4
Full implementation in WormSim
#45 opened Jun 20, 2015 by travs
4 tasks
Add a motor neuron network into WormSim
Design WormSim UI additions for the muscle neuron model
#44 opened Jun 20, 2015 by travs Add a motor neuron network into WormSim
Run multi-scale optimization for motor neuron network
#42 opened Jun 20, 2015 by travs Add a motor neuron network into WormSim
Create a multi-level optimization scaffold that tunes motor neuron network parameters to fit within physiological bounds
#41 opened Jun 20, 2015 by travs Add a motor neuron network into WormSim
1
Create appropriate tests to constrain motor neuron network parameters within physiological bounds
#40 opened Jun 20, 2015 by travs
2 tasks
Add a motor neuron network into WormSim
Construct target quantitative/qualitative electrophysiological behaviour
#39 opened Jun 17, 2015 by travs
2 tasks
Add a motor neuron network into WormSim
Verify that the neurons, channels and parameters for this subnetwork are visible in the model completion dashboard
#38 opened Jun 17, 2015 by travs Add a motor neuron network into WormSim
Create validation tests for all gap junctions between key motor neurons
#37 opened Jun 17, 2015 by travs
8 tasks
Add a motor neuron network into WormSim
Create validation tests for all synapses between key motor neurons
#36 opened Jun 17, 2015 by travs
8 tasks
Add a motor neuron network into WormSim
Embed best-guess ion channels in motor/neuron cell models
#35 opened Jun 17, 2015 by travs
8 tasks
Add a motor neuron network into WormSim
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